Balík: fastx-toolkit (0.0.14-6)

[ Zdroj: fastx-toolkit  ]

FASTQ/A short nucleotide reads pre-processing tools

The FASTX-Toolkit is a collection of command line tools for preprocessing short nucleotide reads in FASTA and FASTQ formats, usually produced by Next-Generation sequencing machines. The main processing of such FASTA/FASTQ files is mapping (aligning) the sequences to reference genomes or other databases using specialized programs like BWA, Bowtie and many others. However, it is sometimes more productive to preprocess the FASTA/FASTQ files before mapping the sequences to the genome—manipulating the sequences to produce better mapping results. The FASTX-Toolkit tools perform some of these preprocessing tasks.

Značky: Role: Program

Ostatné balíky súvisiace s balíkom fastx-toolkit

• dep: libc6 (>= 2.14)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libgcc1 (>= 1:3.0)

  podporná knižnica GCC

• dep: libgd-graph-perl

  Graph Plotting Module for Perl 5

• dep: libgtextutils0v5

  Gordon Text_utils library

• dep: libperlio-gzip-perl

  modul poskytujúci vrstvu PerlIO k gzip/gunzip

• dep: libstdc++6 (>= 5.2)

  štandardná knižnica C++ GNU v3

Stiahnuť fastx-toolkit

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Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	109.8 kB	615.0 kB	[zoznam súborov]