Balík: sumaclust (1.0.36+ds-1)

[ Zdroj: sumaclust  ]

fast and exact clustering of genomic sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.

Ostatné balíky súvisiace s balíkom sumaclust

• dep: libc6 (>= 2.14) [amd64]

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.7) [nie amd64, arm64, ppc64el]

• dep: libgomp1 (>= 6)

  podporná knižnica GCC OpenMP (GOMP)

• dep: libsuma1 (>= 1.0.35)

  shared library for sumatra and sumaclust

Stiahnuť sumaclust

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	100.4 kB	163.0 kB	[zoznam súborov]
arm64	99.5 kB	158.0 kB	[zoznam súborov]
armel	101.4 kB	162.0 kB	[zoznam súborov]
armhf	99.3 kB	150.0 kB	[zoznam súborov]
i386	100.7 kB	162.0 kB	[zoznam súborov]
mips64el	99.9 kB	160.0 kB	[zoznam súborov]
mipsel	99.8 kB	159.0 kB	[zoznam súborov]
ppc64el	101.2 kB	195.0 kB	[zoznam súborov]
s390x	99.3 kB	158.0 kB	[zoznam súborov]