[ Zdroj: seqtools ]
Balík: belvu (4.44.1+dfsg-6 a iné)
Odkazy pre belvu
Zdroje Debian:
Stiahnuť zdrojový balík seqtools:
- [seqtools_4.44.1+dfsg-6.dsc]
- [seqtools_4.44.1+dfsg.orig.tar.xz]
- [seqtools_4.44.1+dfsg-6.debian.tar.xz]
Správcovia:
Externé zdroje:
- Domovská stránka [www.sanger.ac.uk]
Podobné balíky:
multiple sequence alignment viewer and phylogenetic tool
Belvu is a multiple sequence alignment viewer and phylogenetic tool with an extensive set of user-configurable modes to color residues.
* View multiple sequence alignments. * Residues can be coloured by conservation, with user-configurable cutoffs and colours. * Residues can be coloured by residue type (user-configurable). * Colour schemes can be imported or exported. * Swissprot (or PIR) entries can be fetched by double clicking. * The position in the alignment can be easily tracked. * Manual deletion of rows and columns. * Automatic editing of rows and columns based on customisable criteria: - removal of all-gap columns; - removal of all gaps; - removal of redundant sequences; - removal of a column by a user-specified percentage of gaps; - filtering of sequences by percent identity; - removal of sequences by a user-specified percentage of gaps; - removal of partial sequences (those starting or ending with gaps); and - removal of columns by conservation (with user-specified upper/lower cutoffs). * The alignment can be saved in Stockholm, Selex, MSF or FASTA format. * Distance matrices between sequences can be generated using a variety of distance metrics. * Distance matrices can be imported or exported. * Phylogenetic trees can be constructed based on various distance-based tree reconstruction algorithms. * Trees can be saved in New Hampshire format. * Belvu can perform bootstrap phylogenetic reconstruction.
Ostatné balíky súvisiace s balíkom belvu
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- dep: libc6 (>= 2.29)
- knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libcairo2 (>= 1.2.4)
- 2D vektorová grafická knižnica Cairo
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- dep: libcurl4 (>= 7.16.2)
- jednoducho použiteľná klientská knižnica na prenos URL (OpenSSL)
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- dep: libgbtools0 (>= 4.44.1+dfsg)
- library for visualising sequence alignments
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- dep: libglib2.0-0 (>= 2.22.0)
- knižnica glib funkcií jazyka C
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- dep: libgtk2.0-0 (>= 2.12.0)
- GTK graphical user interface library - old version
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- dep: libpango-1.0-0 (>= 1.14.0)
- rozloženie a vykreslenie internacionalizovaného textu
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- dep: libstdc++6 (>= 4.1.1)
- štandardná knižnica C++ GNU v3
Stiahnuť belvu
Architektúra | Verzia | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
---|---|---|---|---|
s390x | 4.44.1+dfsg-6+b1 | 1,023.3 kB | 1,255.0 kB | [zoznam súborov] |