Balík: libvcflib-tools (1.0.3+dfsg-2)

[ Zdroj: libvcflib  ]

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

Ostatné balíky súvisiace s balíkom libvcflib-tools

• dep: libc6 (>= 2.34)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [amd64, arm64, mips64el, ppc64el]

  library for indexing and sequence extraction from FASTA files (lib)

  dep: libfastahack0 (>= 1.0.0+dfsg) [nie amd64, arm64, mips64el, ppc64el]

• dep: libgcc-s1 (>= 3.0) [nie armel, armhf, ppc64el]

  podporná knižnica GCC

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 11)

  štandardná knižnica C++ GNU v3

• dep: libtabixpp0 (>= 1.0.0)

  C++ wrapper to tabix indexer

• dep: libvcflib1 (>= 1.0.3+dfsg)

  C++ library for parsing and manipulating VCF files

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: r-base-core

  jadro GNU R na štatistické výpočty a grafický systém

• dep: r-cran-ggplot2

  implementácia Gramatiky grafiky

• dep: r-cran-gridbase

  GNU R Integration of base and grid graphics

• dep: r-cran-plyr

  nástroje na rozdeľovanie, aplikovanie a kombinovanie dát

• sug: r-cran-pracma

  practical numerical math functions for GNU R

Stiahnuť libvcflib-tools

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	730.3 kB	4,880.0 kB	[zoznam súborov]
arm64	651.0 kB	6,692.0 kB	[zoznam súborov]
armel	623.8 kB	6,603.0 kB	[zoznam súborov]
armhf	641.6 kB	6,219.0 kB	[zoznam súborov]
i386	759.9 kB	4,915.0 kB	[zoznam súborov]
mips64el	645.8 kB	7,617.0 kB	[zoznam súborov]
mipsel	650.6 kB	7,253.0 kB	[zoznam súborov]
ppc64el	712.4 kB	7,716.0 kB	[zoznam súborov]
s390x	652.4 kB	4,620.0 kB	[zoznam súborov]