Balík: r-bioc-hdf5array (1.26.0-1)

[ Zdroj: r-bioc-hdf5array  ]

HDF5 backend for DelayedArray objects

Implements the HDF5Array and TENxMatrix classes, 2 convenient and memory-efficient array-like containers for on-disk representation of HDF5 datasets. HDF5Array is for datasets that use the conventional (i.e. dense) HDF5 representation. TENxMatrix is for datasets that use the HDF5-based sparse matrix representation from 10x Genomics (e.g. the 1.3 Million Brain Cell Dataset). Both containers being DelayedArray extensions, they support all operations supported by DelayedArray objects. These operations can be either delayed or block-processed.

Ostatné balíky súvisiace s balíkom r-bioc-hdf5array

• dep: libc6 (>= 2.4)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libhdf5-103-1

  HDF5 C runtime files - serial version

• dep: libhdf5-hl-100

  HDF5 High Level runtime files - serial version

• dep: r-api-4.0

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.16

  virtuálny balík poskytovaný balíkom r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  jadro GNU R na štatistické výpočty a grafický systém

• dep: r-bioc-biocgenerics (>= 0.31.5)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.15.16)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rhdf5 (>= 2.31.6)

  BioConductor HDF5 interface to R

• dep: r-bioc-rhdf5filters

  GNU R HDF5 compression filters

• dep: r-bioc-rhdf5lib

  GNU R hdf5 library

• dep: r-bioc-s4vectors (>= 0.27.13)

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-matrix

  balík tried GNU R pre husté a riedke matice

• sug: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• sug: r-bioc-experimenthub

  BioConductor client to access ExperimentHub resources

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• sug: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• sug: r-bioc-summarizedexperiment (>= 1.15.1)

  BioConductor assay container

• sug: r-cran-runit

  GNU R package providing unit testing framework

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