Balík: python3-bcbio (1.2.9-2) [contrib]
Odkazy pre python3-bcbio
Zdroje Debian:
Stiahnuť zdrojový balík bcbio:
Správcovia:
Externé zdroje:
- Domovská stránka [github.com]
Podobné balíky:
library for analysing high-throughput sequencing data
This package installs the Python 3 libraries of the bcbio-nextgen toolkit implementing best-practice pipelines for fully automated high throughput sequencing analysis.
A high-level configuration file specifies inputs and analysis parameters to drive a parallel pipeline that handles distributed execution, idempotent processing restarts and safe transactional steps. The project contributes a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.
Ostatné balíky súvisiace s balíkom python3-bcbio
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-cyvcf2
- VCF parser based on htslib (Python 3)
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- dep: python3-joblib
- nástroje na nenáročnú tvorbu rúr v jazyku Python
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- dep: python3-logbook
- logging system for Python that replaces the standard library's module (Python 3)
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- dep: python3-matplotlib
- systém v Pythone na vykresľovanie v štýle podobnom Matlabu - Python 3
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- dep: python3-psutil
- modul poskytujúci funkcie uľahčujúce správu procesov (Python 3)
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-requests
- elegantná a jednoduchá knižnica HTTP pre Python 3 pre ľudí
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- dep: python3-scipy
- vedecké nástroje pre Python 3
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- dep: python3-six
- Python 2 and 3 compatibility library
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- dep: python3-tornado
- škálovateľný, neblokujúci webový server a nástroje - balík pre Python 3
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- rec: cnvkit
- Copy number variant detection from targeted DNA sequencing
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- rec: gsort
- sort genomic data
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- rec: libfreetype6
- správa písiem FreeType 2 - zdieľané knižnice
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- rec: libhts-dev
- development files for the HTSlib
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- rec: lumpy-sv
- general probabilistic framework for structural variant discovery
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- rec: mosdepth
- BAM/CRAM depth calculation biological sequencing
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- rec: multiqc
- output integration for RNA sequencing across tools and samples
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- rec: python3-arrow
- Python3 library to manipulate dates, times, and timestamps
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- rec: python3-geneimpacts
- wraps command line tools to assess variants in gene sequences
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- rec: python3-h5py
- general-purpose Python interface to hdf5
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- rec: python3-pyvcf
- virtuálny balík poskytovaný balíkom python3-vcf
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- rec: python3-seqcluster
- analysis of small RNA in NGS data
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- rec: python3-statsmodels
- Python3 module for the estimation of statistical models
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- rec: python3-tabulate
- pretty-print tabular data in Python3
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- rec: r-bioc-purecn
- copy number calling and SNV classification using targeted short read sequencing
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- rec: r-bioc-titancna
- Subclonal copy number and LOH prediction from whole genome sequencing
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- rec: r-other-wasabi
- prepare Sailfish and Salmon output for downstream analysis using GNU R
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- rec: seqan-apps
- C++ library for the analysis of biological sequences
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- rec: snpeff
- genetic variant annotation and effect prediction toolbox - tool
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- rec: vcfanno
- annotate a VCF with other VCFs/BEDs/tabixed files
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- rec: vt
- toolset for short variant discovery in genetic sequence data
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- sug: bcbio-doc
- Balík nie je dostupný
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- sug: python3-bioblend
- CloudMan and Galaxy API library (Python 3)
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- sug: python3-dnapilib
- adapter prediction for small RNA sequencing - library
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- sug: python3-msgpack
- implementácia formátu MessagePack v Python 3
Stiahnuť python3-bcbio
Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
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all | 1,239.7 kB | 4,871.0 kB | [zoznam súborov] |