Package: bedtools (2.26.0+dfsg-5) [debports]

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suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Other Packages Related to bedtools

• dep: libc6 (>= 2.23)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:3.4)

  Package not available

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
sparc64 (unofficial port)	460.9 kB	1,898.0 kB	[list of files]