Package: lagan (2.0-10) [debports]
Links for lagan
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External Resources:
- Homepage [lagan.stanford.edu]
Similar packages:
highly parametrizable pairwise global genome sequence aligner
Lagan takes local alignments generated by CHAOS as anchors, and limits the search area of the Needleman-Wunsch algorithm around these anchors.
Multi-LAGAN is a generalization of the pairwise algorithm to multiple sequence alignment. M-LAGAN performs progressive pairwise alignments, guided by a user-specified phylogenetic tree. Alignments are aligned to other alignments using the sum-of-pairs metric.
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Download lagan
Architecture | Package Size | Installed Size | Files |
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ia64 (unofficial port) | 213.5 kB | 1,035.0 kB | [list of files] |