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[ Источник: trnascan-se  ]

Пакет: trnascan-se (2.0.12+ds-1) [non-free]

Ссылки для trnascan-se

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Внешние ресурсы:

Подобные пакеты:

detection of transfer RNA genes in genomic sequence

tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection programs are used as fast, first-pass prefilters to identify candidate tRNAs, which are then analyzed by a highly selective tRNA covariance model. This work represents a practical application of RNA covariance models, which are general, probabilistic secondary structure profiles based on stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s. Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.

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Архитектура Размер пакета В установленном виде Файлы
amd64 154,6 Кб741,0 Кб [список файлов]
arm64 143,7 Кб817,0 Кб [список файлов]
i386 153,9 Кб774,0 Кб [список файлов]