Пакет: edlib-aligner (1.2.7-6 и другие)

[ Источник: libedlib  ]

edlib sequence alignment tool using edit distance

Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.

Features of libedlib

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

Другие пакеты, относящиеся к edlib-aligner

• dep: libc6 (>= 2.38)

  библиотека GNU C: динамически подключаемые библиотеки
  также виртуальный пакет, предоставляемый libc6-udeb

• dep: libedlib1 (= 1.2.7-6+b2)

  library for sequence alignment using edit distance

• dep: libgcc-s1 (>= 3.5)

  вспомогательная библиотека GCC

• dep: libstdc++6 (>= 5.2)

  стандартная библиотека GNU C++ версии 3

Загрузка edlib-aligner

Загрузить для всех доступных архитектур

Архитектура	Версия	Размер пакета	В установленном виде	Файлы
armhf	1.2.7-6+b2	20,4 Кб	46,0 Кб	[список файлов]