Пакет: iqtree (2.0.7+dfsg-1 и другие)

[ Источник: iqtree  ]

efficient phylogenetic software by maximum likelihood

IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others:

 * A novel fast and effective stochastic algorithm to estimate maximum
   likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms
   of likelihood while requiring similar amount of computing time (see
   Nguyen et al., 2015)
 * An ultrafast bootstrap approximation to assess branch supports (see
   Minh et al., 2013).
 * A wide range of substitution models for binary, DNA, protein, codon,
   and morphological alignments.
 * Ultrafast model selection for all data types, 10 to 100 times faster
   than jModelTest and ProtTest.
 * Finding best partition scheme like PartitionFinder.
 * Partitioned models with mixed data types for phylogenomic (multi-
   gene) alignments, allowing for separate, proportional, or joint
   branch lengths among genes.
 * Supporting the phylogenetic likelihod library (PLL) (see Flouri et
   al., 2014)

Другие пакеты, относящиеся к iqtree

• dep: libc6 (>= 2.38)

  библиотека GNU C: динамически подключаемые библиотеки
  также виртуальный пакет, предоставляемый libc6-udeb

• dep: libgcc-s1 (>= 4.0)

  вспомогательная библиотека GCC

• dep: libgomp1 (>= 6)

  вспомогательная библиотека GCC OpenMP (GOMP)

• dep: libopenmpi40 (>= 5.0.6)

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 14)

  стандартная библиотека GNU C++ версии 3

• dep: zlib1g (>= 1:1.1.4)

  библиотека сжатия

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Архитектура	Версия	Размер пакета	В установленном виде	Файлы
amd64	2.0.7+dfsg-1+b2	3 566,8 Кб	25 632,0 Кб	[список файлов]