Пакет: r-bioc-summarizedexperiment (1.34.0+dfsg-1)

[ Источник: r-bioc-summarizedexperiment  ]

BioConductor assay container

The SummarizedExperiment container contains one or more assays, each represented by a matrix-like object of numeric or other mode. The rows typically represent genomic ranges of interest and the columns represent samples.

Другие пакеты, относящиеся к r-bioc-summarizedexperiment

• dep: r-api-4.0

  виртуальный пакет, предоставляемый r-base-core

• dep: r-api-bioc-3.19

  виртуальный пакет, предоставляемый r-bioc-biocgenerics

• dep: r-bioc-biobase (>= 2.64.0)

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.30.1)

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• dep: r-bioc-genomeinfodb (>= 1.40.1)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.56.1)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.38.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics (>= 1.16.0)

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• dep: r-bioc-s4arrays (>= 1.4.1)

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• dep: r-bioc-s4vectors (>= 0.42.1)

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• dep: r-cran-matrix

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• sug: r-bioc-annotate (>= 1.82.0)

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• sug: r-bioc-annotationdbi (>= 1.66.0)

  GNU R Annotation Database Interface for BioConductor

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-hdf5array (>= 1.32.0)

  HDF5 backend for DelayedArray objects

• sug: r-bioc-rhdf5 (>= 2.48.0)

  BioConductor HDF5 interface to R

• sug: r-cran-digest

  GNU R package for 'hash digest' of R data structures

• sug: r-cran-jsonlite

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• sug: r-cran-knitr

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• sug: r-cran-rmarkdown

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• sug: r-cran-runit

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• sug: r-cran-testthat

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