все параметры
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Источник: freecontact  ]

Пакет: libfreecontact-doc (1.0.21-9)

Ссылки для libfreecontact-doc

Screenshot

Ресурсы Debian:

Исходный код freecontact:

Сопровождающие:

Внешние ресурсы:

Подобные пакеты:

documentation for libfreecontact

FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).

FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.

A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.

jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.

This package contains HTML documentation for libfreecontact.

Другие пакеты, относящиеся к libfreecontact-doc

  • зависимости
  • рекомендации
  • предложения
  • enhances

Загрузка libfreecontact-doc

Загрузить для всех доступных архитектур
Архитектура Размер пакета В установленном виде Файлы
all 99,4 Кб1 268,0 Кб [список файлов]