Пакет: lefse (1.1.2-1)

[ Источник: lefse  ]

determine features of organisms, clades, taxonomic units, genes

LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.

Другие пакеты, относящиеся к lefse

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-rpy2

  Python3 interface to the GNU R language and environment (version 2)

• dep: r-cran-coin

  GNU R package providing conditional inference procedures

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