Pacote: flye (2.9.5+dfsg-1)

[ Fonte: flye  ]

de novo assembler for single molecule sequencing reads using repeat graphs

Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.

Outros pacotes relacionados a flye

• dep: libc6 (>= 2.38)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libgcc-s1 (>= 3.4)

  Biblioteca de suporte GCC

• dep: libstdc++6 (>= 14)

  Biblioteca C++ padrão da GNU v3

• dep: minimap2

  versatile pairwise aligner for genomic and spliced nucleotide sequences

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-six

  biblioteca de compatibilidade entre Python 2 e 3

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: zlib1g (>= 1:1.1.4)

  biblioteca de compressão - runtime (tempo de execução)

Download de flye

Baixe para todas as arquiteturas disponíveis

Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
riscv64	22,636.1 kB	36,481.0 kB	[lista de arquivos]