Pacote: maq (0.7.1-10) [debports]

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maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Outros pacotes relacionados a maq

• dep: libc6 (>= 2.38)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libgcc-s1 (>= 4.2)

  Biblioteca de suporte GCC

• dep: libstdc++6 (>= 5)

  Biblioteca C++ padrão da GNU v3

• dep: zlib1g (>= 1:1.2.3.3)

  biblioteca de compressão - runtime (tempo de execução)

• sug: bwa

  Burrows-Wheeler Aligner

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Download de maq

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Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
ppc64 (porte não oficial)	300.7 kB	645.0 kB	[lista de arquivos]