Pacote: bio-eagle (2.4.1-3 e outros)

[ Fonte: bio-eagle  ]

Haplotype phasing within a genotyped cohort or using a phased reference panel

Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.

Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.

Etiquetas: Campo: Biologia, Bioinformática, Implementado em: implemented-in::c++, interface::commandline, Função: Programa, Propósito: Análise

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Download de bio-eagle

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	2.4.1-3+b3	227.5 kB	654.0 kB	[lista de arquivos]
i386	2.4.1-3+b3	253.1 kB	697.0 kB	[lista de arquivos]