Package: spoa (4.1.4-2) [debports]

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SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

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Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	35.9 kB	98.0 kB	[list of files]