Package: eigensoft (8.0.0+dfsg-2 and others) [debports]

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reduction of population bias for genetic analyses

The EIGENSOFT package combines functionality from the group's population genetics methods (Patterson et al. 2006) and their EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker's variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes.

Other Packages Related to eigensoft

• dep: libblas3

  Implementações de Referências Básicas de Álgebra Linear , Biblioteca compartilhada

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6.1 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  also a virtual package provided by libc6.1-udeb

• dep: libgsl28 (>= 2.8+dfsg)

  GNU Scientific Library (GSL) -- library package

• dep: liblapack3

  Biblioteca de rotinas de álgebra linear 3 - versão compartilhada

  or liblapack.so.3

  virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: liblapacke (>= 3.12.0)

  Library of linear algebra routines 3 - C lib shared version

• dep: perl

  Linguagem de extração e relatórios prática de Larry Wall

• rec: gnuplot

  programa de plotagem interativo e de linha de comando
  also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11

Download eigensoft

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	8.0.0+dfsg-2+b1	477.9 kB	4,584.0 kB	[list of files]