Package: cd-hit (4.8.1-4) [debports]

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suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

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Download cd-hit

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	505.8 kB	1,531.0 kB	[list of files]