Package: fastqtl (2.184+dfsg-7 and others)

[ Source: fastqtl  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Tags: Field: Biology, Bioinformatics, User Interface: interface::commandline, role::program, Purpose: Analysing

Other Packages Related to fastqtl

• dep: libblas3

  Implementações de Referências Básicas de Álgebra Linear , Biblioteca compartilhada

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  biblioteca Boost.Iostreams

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.29)

  GNU Biblioteca C: Bibliotecas compartilhadas
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  Biblioteca de suporte GCC

• dep: libgsl25 (>= 2.6)

  GNU Scientific Library (GSL) -- library package

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 9)

  Biblioteca C++ padrão da GNU v3

• dep: r-mathlib

  GNU R standalone mathematics library

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

Download fastqtl

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
mipsel	2.184+dfsg-7+b4	171.3 kB	731.0 kB	[list of files]