Pakiet: igv (2.18.5+dfsg-1)

[ Pakiet źródłowy: igv  ]

Integrative Genomics Viewer

The Integrative Genomics Viewer (IGV) is a high-performance viewer that efficiently handles large heterogeneous data sets, while providing a smooth and intuitive user experience at all levels of genome resolution. A key characteristic of IGV is its focus on the integrative nature of genomic studies, with support for both array-based and next-generation sequencing data, and the integration of clinical and phenotypic data. Although IGV is often used to view genomic data from public sources, its primary emphasis is to support researchers who wish to visualize and explore their own data sets or those from colleagues. To that end, IGV supports flexible loading of local and remote data sets, and is optimized to provide high-performance data visualization and exploration on standard desktop systems.

Znaczniki: Dziedzina: Biologia, Bioinformatyka, Zaimplementowane w: implemented-in::java, interface::commandline, Interfejs użytkownika: Graphical User Interface, interface::x11, network::client, Protokół sieciowy: HTTP, Rola: Program, Zakres: scope::utility, use::viewing, Działa z: Sekwencje biologiczne, X Window System: Aplikacja

Inne pakiety związane z igv

• dep: default-jre

  Standardowe lub kompatybilne środowisko uruchomieniowe Javy

• dep: libbatik-java

  xml.apache.org SVG Library

• dep: libcommons-io-java

  Common useful IO related classes

• dep: libcommons-lang3-java

  Apache Commons Lang utility classes

• dep: libcommons-math3-java

  Java lightweight mathematics and statistics components

• dep: libdsiutils-java

  Java library of statistical and text data handling tools

• dep: libfastutil-java

  Java API providing type-specific maps, sets, lists and queues

• dep: libgoogle-gson-java

  Converts Java objects into their JSON representation

• dep: libguava-java

  Suite of Google common libraries for Java

• dep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• dep: libicb-utils-java

  Java library of utilities to manage files and compute statistics

• dep: libjide-oss-java

  extensible Swing component library for Java

• dep: libjsap-java

  Java Simple Argument Parser

• dep: liblog4j1.2-java

  Logging library for java

• dep: liblog4j2-java

  Apache Log4j - Logging Framework for Java

• dep: libnb-absolutelayout-java

  Java LayoutManager to allow placement in absolute positions

• dep: libprotobuf-java

  Java bindings for protocol buffers

• dep: libswing-layout-java

  Extensions to Swing layout

• dep: libxml-commons-external-java

  XML Commons external code - DOM, SAX, and JAXP, etc

• rec: libmariadb-java

  Java database driver for MariaDB and MySQL

Pobieranie igv

Pobierz dla wszystkich dostępnych architektur

Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
all	3 237,5 KiB	3 556,0 KiB	[lista plików]