[ trixie ] [ sid ]

Pakiet źródłowy: r-bioc-txdbmaker (1.0.1+ds-1)

Odnośniki dla r-bioc-txdbmaker

Zasoby systemu Debian:

Opiekunowie:

Zasoby zewnętrzne:

Strona internetowa [bioconductor.org]

Z tego pakietu źródłowego zbudowano następujące pakiety binarne:

r-bioc-txdbmaker: Tools for making TxDb objects from genomic annotations

Inne pakiety związane z r-bioc-txdbmaker

build-depends

build-depends-indep

adep: debhelper-compat (= 13)

Pakiet niedostępny
adep: dh-r

Debian helper tools for packaging R libraries
adep: r-base-dev

GNU R installation of auxiliary GNU R packages
adep: r-bioc-biocgenerics (>= 0.50.0)

generic functions for Bioconductor
adep: r-bioc-s4vectors (>= 0.42.1)

BioConductor S4 implementation of vectors and lists
adep: r-bioc-genomeinfodb (>= 1.40.1)

BioConductor utilities for manipulating chromosome identifiers
adep: r-bioc-genomicranges (>= 1.56.1)

BioConductor representation and manipulation of genomic intervals
adep: r-bioc-genomicfeatures (>= 1.56.0)

GNU R tools for making and manipulating transcript centric annotations
adep: r-cran-httr

GNU R tools for working with URLs and HTTP
adep: r-cran-rjson

GNU R package for converting between R and JSON objects
adep: r-cran-dbi

GNU R package providing a generic database interface
adep: r-cran-rsqlite

Database Interface R driver for SQLite
adep: r-bioc-iranges (>= 2.38.1)

GNU R low-level containers for storing sets of integer ranges
adep: r-bioc-ucsc.utils (>> 1.0.0+ds-1)

Low-level utilities to retrieve data from the UCSC Genome
adep: r-bioc-annotationdbi (>= 1.66.0)

GNU R Annotation Database Interface for BioConductor
adep: r-bioc-biobase (>= 2.64.0)

base functions for Bioconductor
adep: r-bioc-biocio (>= 1.14.0)

standard input and output for Bioconductor packages
adep: r-bioc-rtracklayer (>= 1.64.0)

GNU R interface to genome browsers and their annotation tracks
adep: r-bioc-biomart (>= 2.60.1)

GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

Download r-bioc-txdbmaker

Plik	Rozmiar (w KiB)	Suma kontrolna MD5
r-bioc-txdbmaker_1.0.1+ds-1.dsc	2,5 KiB	a2c24377cc7dcf6e4147d9680f084e96
r-bioc-txdbmaker_1.0.1+ds.orig.tar.xz	430,0 KiB	1687f082bf935258a71d4da04a830d08
r-bioc-txdbmaker_1.0.1+ds-1.debian.tar.xz	5,7 KiB	607944372723559bb44c1b13865c3314

Repozytorium kodu źródłowego Debiana (VCS: Git): https://salsa.debian.org/r-pkg-team/r-bioc-txdbmaker.git
Repozytorium kodu źródłowego Debiana (do przeglądania): https://salsa.debian.org/r-pkg-team/r-bioc-txdbmaker