Pakiet: r-bioc-edaseq (2.38.0+dfsg-1)

[ Pakiet źródłowy: r-bioc-edaseq  ]

GNU R exploratory data analysis and normalization for RNA-Seq

Numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010).

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• dep: r-api-bioc-3.19

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• dep: r-bioc-annotationdbi (>= 1.66.0)

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• dep: r-bioc-biobase (>= 2.64.0)

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• dep: r-bioc-biomart (>= 2.60.1)

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• dep: r-bioc-biostrings (>= 2.72.1)

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