Pakiet: r-bioc-tximport (1.32.0+dfsg-1)

[ Pakiet źródłowy: r-bioc-tximport  ]

transcript-level estimates for biological sequencing

Imports transcript-level abundance, estimated counts and transcript lengths, and summarizes into matrices for use with downstream gene-level analysis packages. Average transcript length, weighted by sample-specific transcript abundance estimates, is provided as a matrix which can be used as an offset for different expression of gene-level counts.

Inne pakiety związane z r-bioc-tximport

• dep: r-api-4.0

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• dep: r-api-bioc-3.19

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• sug: r-bioc-deseq2 (>= 1.11.6)

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• sug: r-bioc-limma

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• sug: r-bioc-rhdf5

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• sug: r-bioc-tximportdata

  GNU R various transcript abundance quantifiers

• sug: r-cran-jsonlite

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• sug: r-cran-knitr

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• sug: r-cran-matrix

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• sug: r-cran-matrixstats

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• sug: r-cran-readr (>= 0.2.2)

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• sug: r-cran-rmarkdown

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• sug: r-cran-testthat

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