Pakiet: proalign (0.603-6) [debports]

[ Pakiet źródłowy:  ]

Probabilistic multiple alignment program

ProAlign performs probabilistic sequence alignments using hidden Markov models (HMM). It includes a graphical interface (GUI) allowing to (i) perform alignments of nucleotide or amino-acid sequences, (ii) view the quality of solutions, (iii) filter the unreliable alignment regions and (iv) export alignments to other software.

ProAlign uses a progressive method, such that multiple alignment is created stepwise by performing pairwise alignments in the nodes of a guide tree. Sequences are described with vectors of character probabilities, and each pairwise alignment reconstructs the ancestral (parent) sequence by computing the probabilities of different characters according to an evolutionary model.

Inne pakiety związane z proalign

• dep: default-jre

  Standardowe lub kompatybilne środowisko uruchomieniowe Javy

Pobieranie proalign

Pobierz dla wszystkich dostępnych architektur

Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
ppc64 (port nieoficjalny)	164,7 KiB	184,0 KiB	[lista plików]