Pakiet: r-bioc-hdf5array (1.32.1-1)

[ Pakiet źródłowy: r-bioc-hdf5array  ]

HDF5 backend for DelayedArray objects

Implements the HDF5Array and TENxMatrix classes, 2 convenient and memory-efficient array-like containers for on-disk representation of HDF5 datasets. HDF5Array is for datasets that use the conventional (i.e. dense) HDF5 representation. TENxMatrix is for datasets that use the HDF5-based sparse matrix representation from 10x Genomics (e.g. the 1.3 Million Brain Cell Dataset). Both containers being DelayedArray extensions, they support all operations supported by DelayedArray objects. These operations can be either delayed or block-processed.

Inne pakiety związane z r-bioc-hdf5array

• dep: libc6 (>= 2.4)

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

• dep: libhdf5-103-1t64

  HDF5 C runtime files - serial version

• dep: libhdf5-hl-100t64

  HDF5 High Level runtime files - serial version

• dep: r-api-4.0

  pakiet wirtualny udostępniany przez r-base-core

• dep: r-api-bioc-3.19

  pakiet wirtualny udostępniany przez r-bioc-biocgenerics

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.30.1)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-iranges (>= 2.38.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rhdf5 (>= 2.48.0)

  BioConductor HDF5 interface to R

• dep: r-bioc-rhdf5filters (>= 1.16.0)

  GNU R HDF5 compression filters

• dep: r-bioc-rhdf5lib (>= 1.26.0)

  GNU R hdf5 library

• dep: r-bioc-s4arrays (>= 1.4.1)

  foundation of array-like containers in Bioconductor

• dep: r-bioc-s4vectors (>= 0.42.1)

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-matrix

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• sug: r-bioc-biocparallel (>= 1.38.0)

  BioConductor facilities for parallel evaluation

• sug: r-bioc-delayedmatrixstats (>= 1.26.0)

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• sug: r-bioc-experimenthub (>= 2.12.0)

  BioConductor client to access ExperimentHub resources

• sug: r-bioc-genefilter (>= 1.86.0)

  methods for filtering genes from microarray experiments

• sug: r-bioc-genomicfeatures (>= 1.56.0)

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-genomicranges (>= 1.56.1)

  BioConductor representation and manipulation of genomic intervals

• sug: r-bioc-singlecellexperiment (>= 1.26.0)

  S4 Classes for Single Cell Data

• sug: r-bioc-summarizedexperiment (>= 1.34.0)

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• sug: r-cran-runit

  GNU R package providing unit testing framework

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