Pakiet: yaha (0.1.83-1)

[ Pakiet źródłowy: yaha  ]

find split-read mappings on single-end queries

yaha is an open source, flexible, sensitive and accurate DNA aligner designed for single-end reads. It supports three major modes of operation:

 * The default “Optimal Query Coverage” (-OQC) mode reports the
   best set of alignments that cover the length of each query.
 * Using “Filter By Similarity” (-FBS), along with the best set of
   alignments, yaha will also output alignments that are highly similar
   to an alignment in the best set.
 * Finally, yaha can output all the alignments found for each query.

The -OQC and -FBS modes are specifically tuned to form split read mappings that can be used to accurately identify structural variation events (deletions, duplications, insertions or inversions) between the subject query and the reference genome.

Inne pakiety związane z yaha

• dep: libc6 (>= 2.14) [amd64]

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgcc1 (>= 1:3.5) [armhf]

  Biblioteka wspomagająca GCC

Pobieranie yaha

Pobierz dla wszystkich dostępnych architektur

Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	41,8 KiB	109,0 KiB	[lista plików]
arm64	38,3 KiB	101,0 KiB	[lista plików]
armhf	34,7 KiB	72,0 KiB	[lista plików]
i386	44,9 KiB	112,0 KiB	[lista plików]