Pakiet: python3-unifrac (1.2-3 i inne)

[ Pakiet źródłowy: unifrac  ]

high-performance phylogenetic diversity calculations

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains the Python3 module.

Inne pakiety związane z python3-unifrac

• dep: cython3

  C-Extensions for Python 3

• dep: libc6 (>= 2.14) [amd64]

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [mips64el]

• dep: libssu0 (>= 1.2)

  high-performance phylogenetic diversity calculations (lib)

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-h5py (>= 3.3.0)

  general-purpose Python interface to hdf5

• dep: python3-iow

  balanced parentheses tree structure

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-skbio (>= 0.5.8-3~)

  Python3 data structures, algorithms, educational resources for bioinformatic

Pobieranie python3-unifrac

Pobierz dla wszystkich dostępnych architektur

Architektura	Wersja	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	1.2-3+b1	118,7 KiB	619,0 KiB	[lista plików]
arm64	1.2-3+b1	109,2 KiB	606,0 KiB	[lista plików]
mips64el	1.2-3+b1	106,4 KiB	676,0 KiB	[lista plików]
ppc64el	1.2-3+b1	120,5 KiB	670,0 KiB	[lista plików]