Pakiet: python3-cobra (0.26.2-1)

[ Pakiet źródłowy: python-cobra  ]

constraint-based modeling of biological networks with Python 3

COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses.

Inne pakiety związane z python3-cobra

• dep: python-cobra-data (= 0.26.2-1)

  constraint-based modeling of biological networks (data)

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-appdirs (<< 2)

  determining appropriate platform-specific directories (Python 3)

  dep: python3-appdirs (>= 1.4)

• dep: python3-depinfo

  retrieve and print Python 3 package dependencies

• dep: python3-diskcache

  Python3 module for disk and file backed persistent cache

• dep: python3-future

  Clean single-source support for Python 3 and 2 - Python 3.x

• dep: python3-httpx

  next generation HTTP client

• dep: python3-importlib-resources

  Read resources from Python packages

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-optlang

  sympy based mathematical programming language (Python 3)

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-pydantic

  Data validation and settings management using Python type hinting

• dep: python3-rich

  render rich text, tables, progress bars, syntax highlighting, markdown and more

• dep: python3-ruamel.yaml

  roundtrip YAML parser/emitter (Python 3 module)

• dep: python3-sbml5

  System Biology Markup Language library - Python3 bindings

• dep: python3-simplejson

  simple, fast, extensible JSON encoder/decoder for Python 3.x

• dep: python3-swiglpk (>= 4.65.1)

  Plain Python bindings for the GNU Linear Programming Kit (Python 3)

• dep: python3-tabulate

  pretty-print tabular data in Python3

• sug: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• sug: qsopt-ex

  Exact linear programming solver

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