Pakiet: libfreecontact-doc (1.0.21-13)
Odnośniki dla libfreecontact-doc
Zasoby systemu Debian:
- Raporty o błędach
- Developer Information
- Dziennik zmian w systemie Debian
- Informacje nt. praw autorskich
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Pobieranie pakietu źródłowego freecontact:
Opiekunowie:
Zasoby zewnętrzne:
- Strona internetowa [rostlab.org]
Podobne pakiety:
documentation for libfreecontact
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains HTML documentation for libfreecontact.
Inne pakiety związane z libfreecontact-doc
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- dep: libjs-jquery
- JavaScript library for dynamic web applications
Pobieranie libfreecontact-doc
Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
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all | 102,8 KiB | 1 317,0 KiB | [lista plików] |