Pakiet: mptp (0.2.4-3 i inne)
Odnośniki dla mptp
Zasoby systemu Debian:
- Raporty o błędach
- Developer Information
- Dziennik zmian w systemie Debian
- Informacje nt. praw autorskich
- Śledzenie łatek systemu Debian
Pobieranie pakietu źródłowego mptp:
Opiekunowie:
- Debian Med Packaging Team (Strona QA, Archiwum e-mail)
- Andreas Tille (Strona QA)
- Nilesh Patra (Strona QA)
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
single-locus species delimitation
Implementation of a fast species delimitation method, based on PTP (Zhang et al. 2013) with a 64-bit multi-threaded design that handles very large datasets.
The tool mPTP can handle very large biodiversity datasets. It implements a fast method to compute the ML delimitation from an inferred phylogenetic tree of the samples. Using MCMC, it also computes the support values for each clade, which can be used to assess the confidence of the ML delimitation.
ML delimitation mPTP implements two flavours of the point-estimate solution. First, it implements the original method from (Zhang et al. 2013) where all within-species processes are modelled with a single exponential distribution. mPTP uses a dynamic programming implementation which estimates the ML delimitation faster and more accurately than the original PTP. The dynamic programming implementation has similar properties as (Gulek et al. 2010). See the wiki for more information. The second method assumes a distinct exponential distribution for the branching events of each of the delimited species allowing it to fit to a wider range of empirical datasets.
MCMC method mPTP generates support values for each clades. They represent the ratio of the number of samples for which a particular node was in the between-species process, to the total number of samples.
Inne pakiety związane z mptp
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- dep: libc6 (>= 2.34)
- Biblioteka GNU C: biblioteki współdzielone
również pakiet wirtualny udostępniany przez libc6-udeb
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- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- rec: bash-completion
- Programowalne dopełnianie dla powłoki bash
Pobieranie mptp
Architektura | Wersja | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
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i386 | 0.2.4-3+b2 | 82,4 KiB | 288,0 KiB | [lista plików] |