Pakket: pbbamtools (2.4.0+dfsg-1 en anderen)

[ Bron: pbbam  ]

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

Andere aan pbbamtools gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support bibliotheek

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libpbbam2.4.0 (= 2.4.0+dfsg-1+b3)

  Pacific Biosciences binary alignment/map (BAM) library

• dep: libpbcopper2.3.0 (>= 2.3.0+dfsg)

  data structures, algorithms, and utilities for C++ applications

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

pbbamtools downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	2.4.0+dfsg-1+b3	129,6 kB	475,0 kB	[overzicht]
arm64	2.4.0+dfsg-1+b3	115,8 kB	619,0 kB	[overzicht]
mips64el	2.4.0+dfsg-1+b3	120,5 kB	703,0 kB	[overzicht]
ppc64el	2.4.0+dfsg-1+b3	126,8 kB	683,0 kB	[overzicht]