Pakket: maqview (0.2.5-12)

[ Bron: maqview  ]

graphical read alignment viewer for short gene sequences

Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.

In comparison to tgap-maq, the text-based read alignment viewer written by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file.

Andere aan maqview gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgl1

  Vendor neutral GL dispatch library -- legacy GL support

• dep: libglu1-mesa

  Mesa OpenGL utility library (GLU)

  of libglu1

  virtueel pakket geboden door libglu1-mesa

• dep: libglut3.12 (>= 3.4.0)

  OpenGL Utility Toolkit

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

maqview downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
mips64el	116,5 kB	1.114,0 kB	[overzicht]