Pakket: mapdamage (2.2.2+dfsg-1)

[ Bron: mapdamage  ]

tracking and quantifying damage patterns in ancient DNA sequences

MapDamage is a computational framework written in Python and R, which tracks and quantifies DNA damage patterns among ancient DNA sequencing reads generated by Next-Generation Sequencing platforms.

MapDamage is developed at the Centre for GeoGenetics by the Orlando Group.

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• dep: python3

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• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: r-base-core

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• dep: r-cran-gam

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• dep: r-cran-ggplot2

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• dep: r-cran-rcpp

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• dep: r-cran-rcppgsl

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• dep: seqtk

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Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
all	41,1 kB	192,0 kB	[overzicht]