Pakket: libssw0 (1.1-15 en anderen) [debports]

[ Bron:  ]

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

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• dep: libc6 (>= 2.40)

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  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.3.1)

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• dep: libstdc++6 (>= 11)

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libssw0 downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
sh4 (unofficial port)	1.1-15+b1	27,9 kB	84,0 kB	[overzicht]