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Pakket: ncbi-seg (0.0.20000620-7 en anderen)

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tool to mask segments of low compositional complexity in amino acid sequences

ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences.

ncbi-seg divides sequences into contrasting segments of low-complexity and high-complexity. Low-complexity segments defined by the algorithm represent "simple sequences" or "compositionally-biased regions".

This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.

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Pakket downloaden voor alle beschikbare platforms
Platform Versie Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 0.0.20000620-7 81,9 kB177,0 kB [overzicht]
amd64 0.0.20000620-7 81,9 kB141,0 kB [overzicht]
arm64 0.0.20000620-7 81,3 kB177,0 kB [overzicht]
armel 0.0.20000620-7 81,2 kB136,0 kB [overzicht]
armhf 0.0.20000620-7 79,6 kB128,0 kB [overzicht]
hppa (unofficial port) 0.0.20000620-7 76,5 kB133,0 kB [overzicht]
i386 0.0.20000620-7 82,5 kB140,0 kB [overzicht]
ia64 (unofficial port) 0.0.20000620-6 86,8 kB159,0 kB [overzicht]
m68k (unofficial port) 0.0.20000620-7 80,3 kB136,0 kB [overzicht]
mips64el 0.0.20000620-7 81,9 kB180,0 kB [overzicht]
ppc64 (unofficial port) 0.0.20000620-7 84,5 kB177,0 kB [overzicht]
ppc64el 0.0.20000620-7 83,8 kB177,0 kB [overzicht]
riscv64 0.0.20000620-7 81,6 kB133,0 kB [overzicht]
s390x 0.0.20000620-7 81,9 kB141,0 kB [overzicht]
sh4 (unofficial port) 0.0.20000620-7 81,5 kB176,0 kB [overzicht]
sparc64 (unofficial port) 0.0.20000620-7 80,7 kB1.138,0 kB [overzicht]
x32 (unofficial port) 0.0.20000620-7 81,8 kB140,0 kB [overzicht]