Pakket: ncbi-entrez-direct (19.2.20230331+dfsg-3 en anderen)

[ Bron: ncbi-entrez-direct  ]

NCBI Entrez utilities on the command line

Entrez Direct (EDirect) is an advanced method for accessing NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a terminal window or script. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.

EDirect also provides an argument-driven function that simplifies the extraction of data from document summaries or other results that are returned in structured XML format. This can eliminate the need for writing custom software to answer ad hoc questions. Queries can move seamlessly between EDirect commands and UNIX utilities or scripts to perform actions that cannot be accomplished entirely within Entrez.

Andere aan ncbi-entrez-direct gerelateerde pakketten

• dep: curl [niet alpha, hppa, m68k, ppc64, sh4, sparc64, x32]

  command line tool for transferring data with URL syntax

  of wget

  retrieves files from the web

• dep: libc6 (>= 2.34) [niet alpha, hppa, m68k, ppc64, sh4, sparc64, x32]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.4) [sparc64]

• dep: libc6.1 (>= 2.1.3) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc1 (>= 1:3.0) [alpha, sparc64]

  Pakket niet beschikbaar

• dep: libgo11 [alpha]

  Pakket niet beschikbaar

• dep: libgo13 [sparc64]

  Pakket niet beschikbaar

• dep: libwww-perl [alpha, hppa, m68k, ppc64, sh4, sparc64, x32]

  simple and consistent interface to the world-wide web

• dep: perl [alpha, hppa, m68k, ppc64, sh4, sparc64, x32]

  Larry Wall's Practical Extraction and Report Language

• rec: python3

  interactive high-level object-oriented language (default python3 version)

• sug: curl

  command line tool for transferring data with URL syntax

• sug: libxml-simple-perl

  Perl module for reading and writing XML

• sug: libxml2-utils

  GNOME XML library - utilities

• sug: perl

  Larry Wall's Practical Extraction and Report Language

• sug: unzip

  De-archiver for .zip files

ncbi-entrez-direct downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	7.40.20170928+ds-1	294,6 kB	1.343,0 kB	[overzicht]
amd64	19.2.20230331+dfsg-3+b3	6.429,0 kB	27.519,0 kB	[overzicht]
arm64	19.2.20230331+dfsg-3+b3	5.410,5 kB	26.287,0 kB	[overzicht]
armel	19.2.20230331+dfsg-3+b3	5.354,2 kB	26.174,0 kB	[overzicht]
armhf	19.2.20230331+dfsg-3+b3	5.288,2 kB	25.982,0 kB	[overzicht]
hppa (unofficial port)	6.90.20170705+ds-2	62,3 kB	290,0 kB	[overzicht]
i386	19.2.20230331+dfsg-3+b3	5.659,0 kB	25.836,0 kB	[overzicht]
m68k (unofficial port)	6.90.20170705+ds-2	62,3 kB	290,0 kB	[overzicht]
mips64el	19.2.20230331+dfsg-3+b3	5.436,6 kB	29.692,0 kB	[overzicht]
ppc64 (unofficial port)	7.40.20170928+ds-1	642,1 kB	2.558,0 kB	[overzicht]
ppc64el	19.2.20230331+dfsg-3+b3	5.501,7 kB	27.051,0 kB	[overzicht]
riscv64	19.2.20230331+dfsg-3+b4	5.404,8 kB	25.967,0 kB	[overzicht]
s390x	19.2.20230331+dfsg-3+b3	6.099,3 kB	28.911,0 kB	[overzicht]
sh4 (unofficial port)	6.90.20170705+ds-2	62,3 kB	290,0 kB	[overzicht]
sparc64 (unofficial port)	7.40.20170928+ds-1	253,4 kB	1.301,0 kB	[overzicht]
x32 (unofficial port)	6.90.20170705+ds-2	62,3 kB	290,0 kB	[overzicht]