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Pakket: lagan (2.0-10) [debports]

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highly parametrizable pairwise global genome sequence aligner

Lagan takes local alignments generated by CHAOS as anchors, and limits the search area of the Needleman-Wunsch algorithm around these anchors.

Multi-LAGAN is a generalization of the pairwise algorithm to multiple sequence alignment. M-LAGAN performs progressive pairwise alignments, guided by a user-specified phylogenetic tree. Alignments are aligned to other alignments using the sum-of-pairs metric.

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Platform Pakketgrootte Geïnstalleerde grootte Bestanden
m68k (unofficial port) 155,6 kB683,0 kB [overzicht]