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Pakket: libedlib1 (1.2.7-6 en anderen)

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library for sequence alignment using edit distance

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as:

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;
Features

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the shared library.

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Pakket downloaden voor alle beschikbare platforms
Platform Versie Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 1.2.7-6+b2 16,4 kB84,0 kB [overzicht]
amd64 1.2.7-6+b2 17,7 kB51,0 kB [overzicht]
arm64 1.2.7-6+b2 17,0 kB83,0 kB [overzicht]
armel 1.2.7-6+b2 14,7 kB43,0 kB [overzicht]
armhf 1.2.7-6+b2 15,0 kB39,0 kB [overzicht]
hppa (unofficial port) 1.2.7-6+b2 17,6 kB43,0 kB [overzicht]
i386 1.2.7-6+b2 17,5 kB51,0 kB [overzicht]
ia64 (unofficial port) 1.2.7-5 19,8 kB62,0 kB [overzicht]
m68k (unofficial port) 1.2.7-6+b2 16,6 kB51,0 kB [overzicht]
mips64el 1.2.7-6+b2 16,2 kB84,0 kB [overzicht]
ppc64 (unofficial port) 1.2.7-6+b2 17,6 kB83,0 kB [overzicht]
ppc64el 1.2.7-6+b2 19,6 kB83,0 kB [overzicht]
riscv64 1.2.7-6+b2 15,5 kB39,0 kB [overzicht]
s390x 1.2.7-6+b2 18,9 kB51,0 kB [overzicht]
sh4 (unofficial port) 1.2.7-6+b2 18,6 kB83,0 kB [overzicht]
sparc64 (unofficial port) 1.2.7-6+b2 15,0 kB1.044,0 kB [overzicht]
x32 (unofficial port) 1.2.7-5+b1 17,3 kB47,0 kB [overzicht]