Pakket: tabix (1.19+ds-1.1 en anderen) [debports]

[ Bron:  ]

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Andere aan tabix gerelateerde pakketten

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6.1 (>= 2.37)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libdeflate0 (>= 1.0)

  fast, whole-buffer DEFLATE-based compression and decompression

• dep: libhtscodecs2 (>= 1.3.0)

  Custom compression for CRAM and others

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  XZ-format compression library

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

tabix downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
ia64 (unofficial port)	1.19+ds-1.1+b1	558,6 kB	4.599,0 kB	[overzicht]