Pakket: libssw1 (1.2.5-1 en anderen)

[ Bron: libssw  ]

Experimenteel pakket

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Andere aan libssw1 gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, ia64, m68k]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g

  compressiebibliotheek - programma's

libssw1 downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.2.5-1	24,3 kB	85,0 kB	[overzicht]
amd64	1.2.5-1	20,9 kB	56,0 kB	[overzicht]
arm64	1.2.5-1	19,4 kB	84,0 kB	[overzicht]
armel	1.2.5-1	20,2 kB	56,0 kB	[overzicht]
armhf	1.2.5-1	20,7 kB	52,0 kB	[overzicht]
i386	1.2.5-1	25,2 kB	80,0 kB	[overzicht]
ia64 (unofficial port)	1.2.5-1	28,7 kB	89,0 kB	[overzicht]
m68k (unofficial port)	1.2.5-1	23,1 kB	68,0 kB	[overzicht]
mips64el	1.2.5-1	24,5 kB	86,0 kB	[overzicht]
ppc64 (unofficial port)	1.2.5-1	25,4 kB	84,0 kB	[overzicht]
ppc64el	1.2.5-1	19,7 kB	84,0 kB	[overzicht]
riscv64	1.2.5-1+b1	25,4 kB	57,0 kB	[overzicht]
s390x	1.2.5-1	24,7 kB	68,0 kB	[overzicht]
sh4 (unofficial port)	1.2.5-1	26,9 kB	84,0 kB	[overzicht]
sparc64 (unofficial port)	1.2.5-1	23,0 kB	1.046,0 kB	[overzicht]
x32 (unofficial port)	1.2.5-1	20,8 kB	56,0 kB	[overzicht]