[ buster ]
[ Bron: cyvcf2 ]
Pakket: python-cyvcf2 (0.10.4-1)
Verwijzigingen voor python-cyvcf2
Debian bronnen:
Het bronpakket cyvcf2 downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Steffen Moeller (QA-pagina)
- Liubov Chuprikova (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
VCF parser based on htslib (Python 2)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 2.
Andere aan python-cyvcf2 gerelateerde pakketten
|
|
|
|
-
- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.7) [armhf, i386]
-
- dep: libcurl3-gnutls (>= 7.16.2)
- easy-to-use client-side URL transfer library (GnuTLS flavour)
-
- dep: libhts2 (>= 1.2.1)
- C library for high-throughput sequencing data formats
-
- dep: liblzma5 (>= 5.1.1alpha+20110809)
- XZ-format compression library
-
- dep: libssl1.1 (>= 1.1.0)
- Secure Sockets Layer toolkit - shared libraries
-
- dep: python
- interactive high-level object-oriented language (Python2 version)
- dep: python (<< 2.8)
- dep: python (>= 2.7~)
-
- dep: python-numpy (>= 1:1.16.0~rc1)
- Numerical Python adds a fast array facility to the Python language
-
- dep: python-numpy-abi9
- virtueel pakket geboden door python-numpy
-
- dep: zlib1g (>= 1:1.1.4)
- compressiebibliotheek - programma's
-
- sug: python-cyvcf2-doc
- Pakket niet beschikbaar