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[ Bron: libgkarrays  ]

Pakket: libgkarrays-dev (2.1.0+dfsg-2)

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library to query large collection of NGS sequences (development)

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

This is the development library for libgkarrays.

Tags: Softwareontwikkeling: Bibliotheken, Role: Development Library

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libgkarrays-dev downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 79,4 kB488,0 kB [overzicht]
arm64 79,7 kB491,0 kB [overzicht]
armhf 85,4 kB439,0 kB [overzicht]
i386 92,6 kB486,0 kB [overzicht]