[ Bron: python-pyfaidx ]
Pakket: python3-pyfaidx (0.5.5.2-1)
Verwijzigingen voor python3-pyfaidx
Debian bronnen:
Het bronpakket python-pyfaidx downloaden:
- [python-pyfaidx_0.5.5.2-1.dsc]
- [python-pyfaidx_0.5.5.2.orig.tar.gz]
- [python-pyfaidx_0.5.5.2-1.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
efficient random access to fasta subsequences for Python 3
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides the Python 3 modules to access fasta files.
Andere aan python3-pyfaidx gerelateerde pakketten
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
-
- dep: python3-six
- Python 2 and 3 compatibility library (Python 3 interface)