Pakket: sigma-align (1.1.3-6)

[ Bron: sigma-align  ]

Simple greedy multiple alignment of non-coding DNA sequences

Sigma (“Simple greedy multiple alignment”) is an alignment program. It's algorithm and scoring scheme are designed specifically for non-coding DNA sequence.

It uses a strategy of seeking the best possible gapless local alignments. This happens at each step making the best possible alignment consistent with existing alignments. It scores the significance of the alignment based on the lengths of the aligned fragments and a background model. These may be supplied or estimated from an auxiliary file of intergenic DNA.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Andere aan sigma-align gerelateerde pakketten

• dep: libc6 (>= 2.14)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libglib2.0-0 (>= 2.12.0)

  GLib library of C routines

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Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	23,6 kB	62,0 kB	[overzicht]