Pakket: r-bioc-titancna (1.28.0-2)

[ Bron: r-bioc-titancna  ]

Subclonal copy number and LOH prediction from whole genome sequencing

Hidden Markov model to segment and predict regions of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH), and estimate cellular prevalence of clonal clusters in tumour whole genome sequencing data.

Andere aan r-bioc-titancna gerelateerde pakketten

• dep: libc6 (>= 2.2)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-api-bioc-3.12

  virtueel pakket geboden door r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biocgenerics (>= 0.31.6)

  generic functions for Bioconductor

• dep: r-bioc-genomeinfodb (>= 1.8.7)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.24.3)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.6.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-variantannotation (>= 1.18.7)

  BioConductor annotation of genetic variants

• dep: r-cran-data.table (>= 1.10.4)

  GNU R extension of Data.frame

• dep: r-cran-dplyr (>= 0.5.0)

  GNU R grammar of data manipulation

• dep: r-cran-foreach (>= 1.4.3)

  GNU R foreach looping support

r-bioc-titancna downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
mipsel	3.857,1 kB	7.615,0 kB	[overzicht]