Pakket: edlib-aligner (1.2.6-1)

[ Bron: libedlib  ]

edlib sequence alignment tool using edit distance

Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.

Features of libedlib

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

Andere aan edlib-aligner gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [niet amd64, arm64, ppc64el]

• dep: libedlib0 (= 1.2.6-1)

  library for sequence alignment using edit distance

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

edlib-aligner downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	22,3 kB	65,0 kB	[overzicht]
arm64	21,3 kB	57,0 kB	[overzicht]
armel	19,0 kB	52,0 kB	[overzicht]
armhf	19,0 kB	48,0 kB	[overzicht]
i386	22,3 kB	64,0 kB	[overzicht]
mips64el	21,2 kB	62,0 kB	[overzicht]
mipsel	21,7 kB	61,0 kB	[overzicht]
ppc64el	25,5 kB	85,0 kB	[overzicht]
s390x	20,9 kB	61,0 kB	[overzicht]