[ Bron: libfastahack ]
Pakket: libfastahack-dev (1.0.0+dfsg-7)
Verwijzigingen voor libfastahack-dev
Debian bronnen:
Het bronpakket libfastahack downloaden:
- [libfastahack_1.0.0+dfsg-7.dsc]
- [libfastahack_1.0.0+dfsg.orig.tar.xz]
- [libfastahack_1.0.0+dfsg-7.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
library for indexing and sequence extraction from FASTA files (devel)
fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.
Features:
* FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided)
Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.
This is the development package containing the statically linked library and the header files.
Andere aan libfastahack-dev gerelateerde pakketten
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- dep: libfastahack0 (= 1.0.0+dfsg-7)
- library for indexing and sequence extraction from FASTA files (lib)