Pakket: seqmagick (0.8.4-1)

[ Bron: seqmagick  ]

imagemagick-like frontend to Biopython SeqIO

Seqmagick is a little utility to expose the file format conversion in BioPython in a convenient way.

Features include:

 * Modifying sequences:
   - Remove gaps
   - Reverse & reverse complement
   - Trim to a range of residues
   - Change case
   - Sort by length or ID
 * Displaying information about sequence files
 * Subsetting sequence files by:
   - Position
   - ID
   - Deduplication
 * Filtering sequences by quality score
 * Trimming alignments to a region of interest defined by the forward
   and reverse primers

Andere aan seqmagick gerelateerde pakketten

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-pygtrie

  Python library implementing a trie data structure (Python 3)

seqmagick downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
all	41,4 kB	226,0 kB	[overzicht]